RGC-1066 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3465 34251 C T 120 3185.74 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34255 C T 129 2163.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34394 C T 250 1011.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34420 C T 250 8117.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34539 C T 250 5397.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34700 C T 249 6710.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3465 34718 C T 250 740.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
Scaffold_3572 13833 C T 147 1524.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 13889 C T 157 370.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 13890 C T 161 1963.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 13908 C T 246 4945.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 14036 C T 63 381.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 14037 C T 55 84.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 14145 C T 74 322.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 14172 C T 65 533.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_3572 14177 C T 63 593.77 noncoding Transition 0/1 NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3)
Scaffold_2890 46344 C T 195 6122.77 exon Transition 1/1 NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
Scaffold_2890 46359 C T 166 5147.77 exon Transition 1/1 NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
Scaffold_2890 46392 C T 68 1837.77 exon Transition 0/1 NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
Scaffold_2890 46422 C T 77 1484.77 exon Transition 0/1 NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)