| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_10 | 1820722 | C | A | 17 | 131.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_10 | 2043298 | T | G | 34 | 41.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 620219 | C | A | 23 | 671.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_11 | 690205 | A | T | 34 | 735.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 690228 | C | G | 31 | 750.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 690250 | T | G | 30 | 130.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 690367 | T | A | 206 | 6139.77 | CDS | Transversion | 1/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 1128200 | G | C | 21 | 610.82 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1129867 | G | C | 109 | 4158.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_11 | 1278950 | G | T | 79 | 2776.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_11 | 1628891 | C | A | 28 | 803.78 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1630278 | A | T | 50 | 1720.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_11 | 1810334 | G | C | 10 | 98.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1812926 | T | G | 15 | 135.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 2211941 | G | T | 28 | 811.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_12 | 49182 | C | A | 15 | 389.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_12 | 308350 | T | G | 13 | 36.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_12 | 356760 | T | A | 22 | 135.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_12 | 356856 | T | A | 42 | 275.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_12 | 356871 | C | G | 47 | 545.77 | exon | Transversion | 0/1 | Unannotated |