| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_53 | 383646 | C | A | 11 | 264.8 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_53 | 438603 | G | T | 20 | 490.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_53 | 726548 | G | C | 14 | 421.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_53 | 1067679 | C | G | 20 | 651.84 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_53 | 1177604 | T | A | 89 | 160.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_53 | 1177859 | G | C | 33 | 874.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_53 | 1177885 | T | G | 106 | 2409.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_53 | 1180877 | C | A | 17 | 94.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_53 | 1521215 | G | T | 13 | 314.78 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_53 | 1810621 | T | G | 26 | 557.31 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_54 | 217324 | T | A | 11 | 178.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_54 | 550610 | A | T | 59 | 58.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_54 | 614810 | C | G | 21 | 799.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_54 | 674913 | G | T | 63 | 1763.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_54 | 753387 | A | C | 11 | 409.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_54 | 1018319 | T | A | 26 | 375.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_54 | 1047488 | C | A | 15 | 424.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_54 | 1381281 | A | C | 13 | 40.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_54 | 1381607 | T | A | 51 | 183.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_55 | 181710 | A | T | 27 | 884.77 | CDS | Transversion | 1/1 | 2-pyrone synthase (2-PS) (EC 2.3.1.-) (G2ps1) |