| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_63 | 480958 | A | C | 15 | 74.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_63 | 481339 | C | A | 27 | 56.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_63 | 546414 | T | G | 16 | 55.77 | CDS | Transversion | 0/1 | Hypersensitive-induced response protein-like protein 2 |
| Scaffold_63 | 1360441 | G | T | 10 | 269.8 | CDS | Transversion | 1/1 | Calmodulin-interacting protein 111 (CaM-interacting protein 111) (ATPase family AAA domain-containing protein CIP111) |
| Scaffold_63 | 1644628 | A | C | 10 | 61.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_63 | 1644629 | G | T | 18 | 336.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 37780 | C | G | 13 | 464.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_64 | 37781 | A | C | 24 | 865.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_64 | 43528 | T | G | 20 | 419.77 | intron | Transversion | 0/1 | ABC transporter G family member 7 (ABC transporter ABCG.7) (AtABCG7) (White-brown complex homolog protein 7) (AtWBC7) |
| Scaffold_64 | 189904 | T | G | 15 | 323.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 517387 | C | A | 60 | 1905.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_64 | 519431 | A | T | 16 | 499.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_64 | 713988 | T | G | 141 | 679.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 713990 | G | T | 141 | 622.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 714036 | T | G | 172 | 901.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 975371 | T | G | 16 | 46.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_64 | 1147896 | T | A | 18 | 34.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_65 | 31661 | G | C | 12 | 352.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_65 | 32505 | A | C | 12 | 378.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_65 | 32506 | G | T | 15 | 489.77 | exon | Transversion | 1/1 | Unannotated |