RGC-1066 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_66 839686 A T 25 883.77 intron Transversion 1/1 Unannotated
Scaffold_66 839712 C G 15 487.77 intron Transversion 1/1 Unannotated
Scaffold_66 1010835 C A 18 448.77 noncoding Transversion 1/1 Unannotated
Scaffold_66 1067982 A T 20 596.77 intron Transversion 1/1 Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)
Scaffold_66 1310658 C G 10 301.78 CDS Transversion 1/1 Unannotated
Scaffold_67 387555 A C 12 305.78 exon Transversion 1/1 Unannotated
Scaffold_67 618473 C A 10 30.77 exon Transversion 0/1 Unannotated
Scaffold_67 618474 C G 10 30.77 exon Transversion 0/1 Unannotated
Scaffold_67 898425 A T 34 894.77 exon Transversion 1/1 Unannotated
Scaffold_67 898449 G T 32 550.77 exon Transversion 0/1 Unannotated
Scaffold_67 898497 C A 27 90.77 exon Transversion 0/1 Unannotated
Scaffold_68 28748 C A 55 1694.77 exon Transversion 1/1 Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
Scaffold_68 452960 G C 21 210.77 exon Transversion 0/1 Unannotated
Scaffold_68 452966 A T 20 210.77 exon Transversion 0/1 Unannotated
Scaffold_68 453009 A T 21 40.77 exon Transversion 0/1 Unannotated
Scaffold_68 454398 C A 25 583.77 CDS Transversion 0/1 Unannotated
Scaffold_68 454419 C A 40 1379.77 CDS Transversion 1/1 Unannotated
Scaffold_68 454440 G C 67 175.77 CDS Transversion 0/1 Unannotated
Scaffold_68 454512 T G 51 1028.77 CDS Transversion 0/1 Unannotated
Scaffold_68 490809 G T 15 468.77 exon Transversion 1/1 Protein trichome birefringence-like 12