RGC-1066 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_76 58982 A T 18 37.77 CDS Transversion 0/1 Unannotated
Scaffold_76 199931 C A 35 1267.77 noncoding Transversion 1/1 Unannotated
Scaffold_78 52302 A T 13 184.77 exon Transversion 0/1 Unannotated
Scaffold_78 115377 T G 28 530.77 exon Transversion 0/1 Unannotated
Scaffold_78 115646 A T 37 1195.82 exon Transversion 1/1 Unannotated
Scaffold_78 162011 G T 13 282.98 noncoding Transversion 0/1 Unannotated
Scaffold_78 203139 A C 43 1217.77 exon Transversion 1/1 Unannotated
Scaffold_80 6842 A C 15 63.77 exon Transversion 0/1 Unannotated
Scaffold_81 170172 C A 17 375.77 exon Transversion 1/1 Unannotated
Scaffold_82 103452 G T 66 1988.77 CDS Transversion 1/1 Unannotated
Scaffold_82 142822 C G 10 35.77 intron Transversion 0/1 Unannotated
Scaffold_82 229091 T A 15 385.77 CDS Transversion 1/1 Unannotated
Scaffold_83 15374 T A 30 1042.77 exon Transversion 1/1 Unannotated
Scaffold_83 15397 A T 15 438.89 exon Transversion 1/1 Unannotated
Scaffold_83 187654 C A 11 307.78 CDS Transversion 1/1 Unannotated
Scaffold_84 61191 G T 12 351.78 noncoding Transversion 1/1 Unannotated
Scaffold_84 88441 A C 10 169.77 intron Transversion 0/1 Unannotated
Scaffold_85 89258 C A 42 1209.77 CDS Transversion 1/1 Unannotated
Scaffold_86 30465 C G 28 991.77 noncoding Transversion 1/1 Unannotated
Scaffold_86 101142 A T 10 301.78 CDS Transversion 1/1 Protein TOC75, chloroplastic (75 kDa chloroplast outer envelope protein) (75 kDa translocon at the outer-envelope membrane of chloroplasts) (Import intermediate-associated protein of 75 kDa)