| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_172 | 281943 | G | T | 41 | 1336.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_172 | 282012 | G | C | 97 | 1119.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282044 | A | C | 97 | 937.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282114 | A | T | 50 | 208.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 284074 | G | C | 40 | 954.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 542023 | G | T | 13 | 110.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 542026 | A | C | 12 | 126.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 543704 | T | G | 17 | 211.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 558044 | G | C | 26 | 659.77 | exon | Transversion | 1/1 | Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-) (Protein ROS4) (Repressor of silencing 4) |
| Scaffold_172 | 558122 | A | T | 10 | 333.78 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_172 | 558562 | G | T | 19 | 483.77 | CDS | Transversion | 1/1 | Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-) (Protein ROS4) (Repressor of silencing 4) |
| Scaffold_172 | 689357 | T | G | 20 | 560.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 2480 | T | A | 11 | 370.77 | exon | Transversion | 1/1 | Probable galacturonosyltransferase 14 (EC 2.4.1.-) |
| Scaffold_173 | 16483 | C | A | 14 | 202.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_173 | 79068 | A | C | 13 | 341.78 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 81434 | G | T | 19 | 605.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 81565 | A | C | 12 | 375.77 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 156362 | C | G | 22 | 751.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 271731 | G | T | 168 | 5176.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_173 | 304577 | A | C | 28 | 894.77 | CDS | Transversion | 1/1 | Unannotated |