RGC-1066 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1231 24437 C A 15 503.77 noncoding Transversion 1/1 Unannotated
Scaffold_1231 24438 T G 13 449.77 noncoding Transversion 1/1 Unannotated
Scaffold_1241 52550 C G 24 831.77 intron Transversion 1/1 Unannotated
Scaffold_1250 23200 C A 24 635.77 exon Transversion 1/1 Unannotated
Scaffold_1250 23288 C G 16 581.77 exon Transversion 1/1 Unannotated
Scaffold_1257 32923 G T 12 175.77 noncoding Transversion 0/1 Unannotated
Scaffold_1273 2728 G T 93 3293.77 noncoding Transversion 1/1 Unannotated
Scaffold_1273 2828 T G 190 6990.77 noncoding Transversion 1/1 Ubiquitin-60S ribosomal protein L40 [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
Scaffold_1273 2830 T A 15 510.77 noncoding Transversion 1/1 Ubiquitin-60S ribosomal protein L40 [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
Scaffold_1274 30388 C G 15 531.77 noncoding Transversion 1/1 Unannotated
Scaffold_1277 43787 A T 50 1820.77 noncoding Transversion 1/1 Unannotated
Scaffold_1285 23918 G T 11 393.77 noncoding Transversion 1/1 Unannotated
Scaffold_1293 17191 A C 13 456.77 noncoding Transversion 1/1 Unannotated
Scaffold_1296 29915 A T 36 195.77 intron Transversion 0/1 Unannotated
Scaffold_1296 30290 T G 247 9248.77 CDS Transversion 1/1 Unannotated
Scaffold_1296 30291 A T 250 8887.77 CDS Transversion 1/1 Unannotated
Scaffold_1300 32986 A T 214 742.77 noncoding Transversion 0/1 Unannotated
Scaffold_1300 33086 C A 98 737.77 noncoding Transversion 0/1 Unannotated
Scaffold_1308 44077 T A 235 397.77 CDS Transversion 0/1 Unannotated
Scaffold_1308 44101 A T 166 839.77 CDS Transversion 0/1 Unannotated