SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
Scaffold_2454
|
92441
|
T
|
A
|
18
|
77.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2455
|
77115
|
C
|
G
|
71
|
31.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2456
|
111833
|
T
|
G
|
105
|
2930.77
|
CDS
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2456
|
113127
|
T
|
A
|
40
|
409.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2463
|
82595
|
G
|
T
|
20
|
701.77
|
intron
|
Transversion
|
1/1
|
Peroxidase 21 (Atperox P21) (EC 1.11.1.7) (ATP2a/ATP2b) (PRXR5)
|
Scaffold_2463
|
129836
|
G
|
T
|
44
|
1390.77
|
exon
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2464
|
62867
|
T
|
G
|
36
|
1171.77
|
noncoding
|
Transversion
|
1/1
|
Protein ELF4-LIKE 4
|
Scaffold_2473
|
96720
|
T
|
A
|
33
|
115.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2474
|
57595
|
T
|
A
|
18
|
89.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2475
|
54336
|
C
|
A
|
11
|
318.56
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2475
|
121718
|
T
|
A
|
62
|
1848.77
|
intron
|
Transversion
|
0/1
|
Elongation factor 1-alpha (EF-1-alpha)
|
Scaffold_2475
|
122073
|
T
|
A
|
250
|
469.77
|
CDS
|
Transversion
|
0/1
|
Elongation factor 1-alpha (EF-1-alpha)
|
Scaffold_2475
|
122076
|
T
|
A
|
249
|
7451.77
|
CDS
|
Transversion
|
0/1
|
Elongation factor 1-alpha (EF-1-alpha)
|
Scaffold_2479
|
100881
|
C
|
A
|
52
|
1448.77
|
exon
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2479
|
128364
|
T
|
G
|
42
|
1163.77
|
exon
|
Transversion
|
1/1
|
DELLA protein RGL1 (GRAS family protein 9) (AtGRAS-9) (RGA-like protein 1) (RGA-like protein)
|
Scaffold_2480
|
115261
|
G
|
C
|
50
|
1783.77
|
exon
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2481
|
90006
|
C
|
A
|
11
|
407.77
|
exon
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2481
|
90351
|
C
|
A
|
10
|
337.77
|
intron
|
Transversion
|
1/1
|
Unannotated
|
Scaffold_2484
|
3706
|
T
|
A
|
12
|
107.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_2485
|
104236
|
T
|
G
|
15
|
49.77
|
exon
|
Transversion
|
0/1
|
Chloride channel protein CLC-c (AtCLC-c) (CBS domain-containing protein CBSCLC4)
|