| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2840 | 7995 | T | A | 47 | 1650.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2841 | 3 | G | C | 250 | 474.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2841 | 103 | G | T | 43 | 1646.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_2841 | 40307 | C | A | 26 | 641.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2841 | 40308 | A | C | 101 | 3381.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2844 | 46533 | T | G | 12 | 275.8 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2849 | 6226 | C | G | 12 | 235.8 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2849 | 6870 | G | T | 11 | 71.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_2850 | 6 | A | C | 36 | 197.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2852 | 4420 | A | C | 35 | 1153.77 | exon | Transversion | 1/1 | Amino acid permease 3 (Amino acid transporter AAP3) |
| Scaffold_2852 | 4591 | T | A | 56 | 2044.77 | exon | Transversion | 1/1 | Amino acid permease 3 (Amino acid transporter AAP3) |
| Scaffold_2853 | 19438 | T | G | 18 | 656.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_2853 | 19609 | T | G | 35 | 61.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2853 | 19638 | G | T | 28 | 852.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_2853 | 33011 | T | G | 90 | 3319.77 | noncoding | Transversion | 1/1 | Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB) |
| Scaffold_2854 | 20290 | G | C | 12 | 308.78 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2856 | 16889 | T | A | 16 | 356.74 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2856 | 16991 | G | T | 30 | 1096.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2856 | 16993 | C | A | 35 | 1282.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2856 | 77415 | G | T | 54 | 1750.77 | noncoding | Transversion | 1/1 | Unannotated |