RGC-1066 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2864 4965 T A 13 36.78 noncoding Transversion 0/1 Unannotated
Scaffold_2865 42327 A C 204 7031.77 noncoding Transversion 1/1 Protein Ycf2
Scaffold_2866 29896 C A 10 300.78 noncoding Transversion 1/1 Unannotated
Scaffold_2872 29047 T A 30 944.77 exon Transversion 1/1 Unannotated
Scaffold_2872 29102 A T 25 31.77 exon Transversion 0/1 Unannotated
Scaffold_2872 29257 C G 16 81.77 intron Transversion 0/1 Unannotated
Scaffold_2872 29283 T A 13 110.77 intron Transversion 0/1 Unannotated
Scaffold_2873 23897 G T 16 448.77 noncoding Transversion 1/1 Cytochrome b6
Scaffold_2876 3220 C A 10 344.77 intron Transversion 1/1 Unannotated
Scaffold_2880 23893 C A 21 736.77 noncoding Transversion 1/1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7)
Scaffold_2882 23552 G T 248 30.77 exon Transversion 0/1 Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
Scaffold_2883 32794 C G 16 403.77 noncoding Transversion 1/1 Unannotated
Scaffold_2883 32795 T G 48 1218.77 noncoding Transversion 1/1 Unannotated
Scaffold_2888 19710 T G 250 2106.77 exon Transversion 0/1 60S ribosomal protein L6-3
Scaffold_2888 19718 C A 250 1524.77 exon Transversion 0/1 60S ribosomal protein L6-3
Scaffold_2888 19719 G C 250 1949.77 exon Transversion 0/1 60S ribosomal protein L6-3
Scaffold_2888 19812 T G 194 1392.77 exon Transversion 0/1 60S ribosomal protein L6-3
Scaffold_2888 45678 G T 111 50.77 noncoding Transversion 0/1 Unannotated
Scaffold_2888 45739 G T 74 383.77 noncoding Transversion 0/1 Unannotated
Scaffold_2890 39606 T G 54 68.77 noncoding Transversion 0/1 Unannotated