| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3075 | 36337 | T | A | 33 | 1249.77 | noncoding | Transversion | 1/1 | Protein Ycf2 |
| Scaffold_3076 | 69114 | T | G | 38 | 58.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3077 | 16538 | T | A | 14 | 368.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3078 | 68826 | A | C | 22 | 779.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_3078 | 68828 | A | C | 42 | 502.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 16234 | C | G | 39 | 63.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 16236 | G | T | 249 | 8081.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_3081 | 16241 | A | C | 249 | 132.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 16257 | T | G | 250 | 1219.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 16329 | A | C | 250 | 129.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 43609 | A | T | 10 | 200.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 45370 | G | T | 10 | 271.8 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_3081 | 48550 | A | T | 16 | 154.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3081 | 48551 | A | C | 14 | 129.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3082 | 2194 | A | C | 15 | 496.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3082 | 2195 | G | T | 15 | 462.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3082 | 15204 | G | C | 10 | 152.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3083 | 1570 | A | T | 106 | 4067.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3083 | 10517 | A | T | 100 | 3652.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3083 | 40959 | C | G | 23 | 706.77 | noncoding | Transversion | 1/1 | Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA) |