| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3443 | 43891 | T | A | 15 | 52.74 | CDS | Transversion | 1/1 | Unannotated |
| Scaffold_3444 | 18918 | C | A | 14 | 519.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3446 | 42546 | A | C | 20 | 140.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3451 | 248 | T | A | 23 | 724.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3451 | 249 | C | A | 15 | 515.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3454 | 1927 | T | G | 10 | 324.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3455 | 1046 | C | G | 27 | 327.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3455 | 12359 | A | C | 250 | 76.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3458 | 37111 | C | A | 27 | 374.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3458 | 37112 | A | C | 92 | 2515.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3459 | 20636 | G | C | 68 | 828.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_3461 | 23593 | G | C | 249 | 31.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23594 | A | T | 249 | 693.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23778 | C | A | 14 | 219.8 | intron | Transversion | 1/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23779 | T | G | 10 | 190.84 | intron | Transversion | 1/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 54876 | T | G | 77 | 1475.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3461 | 54987 | A | C | 29 | 1008.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_3461 | 55003 | A | C | 25 | 912.77 | exon | Transversion | 1/1 | Unannotated |
| Scaffold_3461 | 55087 | A | C | 80 | 1415.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 73805 | A | C | 250 | 1200.77 | intron | Transversion | 0/1 | Unannotated |