RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_27
|
1024392
|
A
|
G
|
28
|
269.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1025420
|
T
|
C
|
10
|
298.31
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1193555
|
T
|
C
|
250
|
9331.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_27
|
1193659
|
C
|
T
|
250
|
9267.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_27
|
1348359
|
A
|
G
|
250
|
167.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1348444
|
C
|
T
|
250
|
879.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1350112
|
G
|
A
|
207
|
2920.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1484311
|
T
|
C
|
20
|
593.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_27
|
1570013
|
G
|
A
|
101
|
3164.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_27
|
1735505
|
A
|
G
|
76
|
2254.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_27
|
1808309
|
A
|
G
|
55
|
122.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1808936
|
T
|
C
|
53
|
366.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1809026
|
G
|
A
|
50
|
594.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1809074
|
G
|
A
|
69
|
783.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1809212
|
C
|
T
|
43
|
619.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1809554
|
G
|
A
|
12
|
140.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1813641
|
G
|
A
|
89
|
985.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_27
|
1813693
|
C
|
T
|
41
|
643.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_28
|
149941
|
A
|
G
|
29
|
800.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_28
|
163693
|
A
|
G
|
32
|
891.77
|
CDS
|
Transition
|
1/1
|
noncoding
|