RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_29
|
425188
|
C
|
T
|
19
|
595.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_29
|
446452
|
T
|
C
|
71
|
33.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
759345
|
G
|
A
|
19
|
31.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
922620
|
A
|
G
|
14
|
100.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
942807
|
A
|
G
|
11
|
116.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
942894
|
A
|
G
|
13
|
33.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
1199737
|
G
|
A
|
47
|
51.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
1199796
|
A
|
G
|
34
|
436.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
1313638
|
T
|
C
|
20
|
641.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_29
|
1320259
|
G
|
A
|
10
|
61.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
1454474
|
G
|
A
|
14
|
46.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_29
|
1484107
|
A
|
G
|
17
|
49.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_30
|
73280
|
G
|
A
|
14
|
284.8
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_30
|
530032
|
T
|
C
|
53
|
48.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_30
|
571893
|
C
|
T
|
10
|
234.84
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_30
|
620109
|
T
|
C
|
18
|
37.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_30
|
955982
|
C
|
T
|
20
|
498.1
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_30
|
1130216
|
G
|
A
|
11
|
169.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_30
|
1136379
|
T
|
C
|
10
|
240.84
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_30
|
1200577
|
A
|
G
|
24
|
34.77
|
exon
|
Transition
|
0/1
|
noncoding
|