RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_32
|
896879
|
A
|
G
|
16
|
383.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_32
|
897078
|
T
|
C
|
14
|
286.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_32
|
1055863
|
C
|
T
|
12
|
330.22
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_32
|
1075534
|
C
|
T
|
21
|
723.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_32
|
1075535
|
G
|
A
|
21
|
806.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
20951
|
C
|
T
|
43
|
738.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_33
|
26181
|
G
|
A
|
59
|
1079.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_33
|
213714
|
A
|
G
|
68
|
140.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_33
|
213720
|
C
|
T
|
57
|
1744.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
216285
|
T
|
C
|
11
|
314.78
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
221028
|
T
|
C
|
20
|
736.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
257065
|
C
|
T
|
21
|
560.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
259013
|
C
|
T
|
10
|
296.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
308405
|
T
|
C
|
15
|
360.78
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
401846
|
C
|
T
|
24
|
526.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_33
|
506751
|
T
|
C
|
15
|
429.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
660181
|
T
|
A,G
|
10
|
218.77
|
intron
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_33
|
878814
|
G
|
A
|
11
|
211.82
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_33
|
952092
|
T
|
C
|
24
|
568.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_33
|
952169
|
G
|
A
|
250
|
1513.77
|
CDS
|
Transition
|
0/1
|
noncoding
|