RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_38
|
2150493
|
C
|
T
|
25
|
67.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_38
|
2158861
|
C
|
T
|
12
|
227.84
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_38
|
2164815
|
C
|
T
|
21
|
642.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_38
|
2223598
|
T
|
C
|
16
|
282.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39278
|
G
|
A
|
35
|
514.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39286
|
C
|
T
|
35
|
167.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39375
|
A
|
G
|
79
|
861.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39441
|
C
|
T
|
16
|
305.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39492
|
A
|
G
|
11
|
174.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39639
|
T
|
C
|
25
|
206.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39745
|
C
|
T
|
15
|
316.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39755
|
G
|
A
|
14
|
291.98
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
39979
|
T
|
C
|
49
|
816.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
40233
|
C
|
T
|
19
|
168.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
40316
|
A
|
G
|
20
|
168.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
40367
|
A
|
G
|
26
|
380.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_40
|
40519
|
T
|
C
|
47
|
1288.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_40
|
63518
|
T
|
C
|
12
|
385.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_40
|
64406
|
A
|
G
|
16
|
549.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_40
|
206291
|
T
|
C
|
28
|
70.77
|
exon
|
Transition
|
0/1
|
noncoding
|