RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_42
|
1096433
|
G
|
A
|
21
|
449.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_42
|
1433945
|
T
|
C
|
250
|
6102.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_42
|
1434252
|
A
|
G,T
|
115
|
3679.77
|
intron
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_43
|
27744
|
T
|
C
|
15
|
199.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
28303
|
A
|
G
|
10
|
138.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
50191
|
A
|
G
|
75
|
64.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
50422
|
G
|
A
|
10
|
268.18
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
513368
|
C
|
T
|
31
|
176.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
513378
|
G
|
A
|
29
|
102.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
575978
|
T
|
C
|
23
|
677.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_43
|
594174
|
A
|
G
|
17
|
43.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
784172
|
A
|
G
|
26
|
622.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
784206
|
A
|
G
|
15
|
292.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
792099
|
A
|
G
|
30
|
50.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
838246
|
C
|
T
|
34
|
155.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
838340
|
G
|
A
|
129
|
2217.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
838361
|
G
|
A
|
164
|
3527.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
838370
|
C
|
T
|
148
|
492.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
941852
|
T
|
C
|
63
|
131.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_43
|
942029
|
C
|
T
|
18
|
487.77
|
intron
|
Transition
|
1/1
|
noncoding
|