RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_49
|
2143595
|
C
|
T
|
97
|
3070.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_49
|
2143616
|
T
|
C
|
23
|
422.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_49
|
2205802
|
T
|
C
|
45
|
196.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_49
|
2206089
|
T
|
C
|
104
|
96.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
264144
|
T
|
C
|
250
|
595.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
264153
|
A
|
G
|
250
|
47.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
589997
|
T
|
C
|
20
|
126.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
735990
|
G
|
A
|
17
|
406.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_50
|
857715
|
A
|
G
|
25
|
53.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
933118
|
C
|
T
|
85
|
665.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
996080
|
A
|
G
|
166
|
117.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_50
|
1222236
|
A
|
G
|
35
|
1186.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_50
|
1477693
|
C
|
T
|
16
|
569.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_50
|
1651744
|
G
|
A
|
14
|
321.78
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_51
|
152004
|
G
|
A
|
69
|
1833.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_51
|
167850
|
A
|
G
|
20
|
491.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_51
|
433076
|
A
|
G
|
15
|
462.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_51
|
433959
|
A
|
G
|
11
|
107.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_51
|
437717
|
A
|
G
|
50
|
539.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_51
|
439082
|
A
|
G
|
31
|
273.77
|
CDS
|
Transition
|
0/1
|
noncoding
|