RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_55
|
843481
|
C
|
T
|
14
|
163.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_55
|
843546
|
G
|
A
|
11
|
67.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_55
|
852809
|
C
|
T
|
175
|
5578.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
927894
|
C
|
T
|
61
|
1750.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
932446
|
G
|
A
|
21
|
750.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
1020295
|
G
|
A
|
10
|
324.78
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
1041627
|
G
|
A
|
19
|
528.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
1247272
|
T
|
C
|
175
|
5094.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
1247373
|
G
|
A
|
27
|
953.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_55
|
1247379
|
C
|
T
|
21
|
788.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_56
|
34250
|
A
|
G
|
25
|
93.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
99034
|
A
|
G
|
31
|
65.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
315525
|
T
|
C
|
24
|
145.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
649141
|
C
|
T
|
12
|
132.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
662113
|
C
|
T
|
28
|
47.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
746160
|
A
|
G
|
10
|
290.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_56
|
885223
|
A
|
G
|
42
|
217.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1081231
|
G
|
A
|
12
|
345.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_56
|
1084900
|
C
|
T
|
29
|
503.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1084994
|
T
|
C
|
16
|
253.77
|
exon
|
Transition
|
0/1
|
noncoding
|