RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_56
|
1085254
|
C
|
T
|
20
|
268.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1085260
|
G
|
A
|
18
|
210.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1085532
|
C
|
T
|
10
|
106.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1085914
|
G
|
A
|
17
|
172.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1085959
|
A
|
G
|
21
|
120.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1102030
|
A
|
G
|
10
|
42.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_56
|
1198950
|
G
|
A
|
11
|
311.78
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_56
|
1217431
|
C
|
T
|
33
|
1114.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_57
|
32748
|
T
|
C
|
22
|
65.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_57
|
66646
|
T
|
C
|
15
|
97.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_57
|
859503
|
G
|
A
|
16
|
43.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_57
|
861327
|
G
|
A
|
14
|
55.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_57
|
1375825
|
C
|
T
|
173
|
4447.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_57
|
1528404
|
C
|
T
|
38
|
501.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_58
|
20839
|
C
|
T
|
12
|
169.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_58
|
408175
|
T
|
C
|
12
|
154.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_58
|
408212
|
A
|
G
|
12
|
110.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_58
|
504964
|
T
|
C
|
25
|
40.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_58
|
542114
|
C
|
T
|
24
|
619.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_58
|
944529
|
C
|
T
|
17
|
243.77
|
intron
|
Transition
|
0/1
|
noncoding
|