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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2495 104307 T C 11 67.77 exon Transition 0/1 U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (... more
U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (RING-type E3 ubiquitin transferase PUB30)
Scaffold_2495 104337 T C 15 180.77 exon Transition 0/1 U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (... more
U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (RING-type E3 ubiquitin transferase PUB30)
Scaffold_53 1116352 G A 16 403.77 CDS Transition 1/1 U-box domain-containing protein 45 (EC 2.3.2.27) (Plant U-box protein 45) (... more
U-box domain-containing protein 45 (EC 2.3.2.27) (Plant U-box protein 45) (RING-type E3 ubiquitin transferase PUB45)
Scaffold_140 372752 T C 11 378.77 intron Transition 1/1 UDP-D-apiose/UDP-D-xylose synthase 2
Scaffold_2695 106840 C T 20 447.77 CDS Transition 1/1 UDP-glycosyltransferase 73C2 (EC 2.4.1.-)
Scaffold_3015 8650 T C 11 269.8 exon Transition 1/1 UDP-glycosyltransferase 87A1 (EC 2.4.1.-)
Scaffold_3763 37575 T C 52 591.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 37587 A G 66 684.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 37692 T C 24 268.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 38914 C T 47 825.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3115 13359 C T 35 73.77 exon Transition 0/1 Uncharacterized mitochondrial protein AtMg00860 (ORF158)
Scaffold_3332 23979 C T 16 403.77 CDS Transition 1/1 Uncharacterized mitochondrial protein AtMg00860 (ORF158)
Scaffold_3789 16635 A G 13 312.78 CDS Transition 1/1 Uncharacterized mitochondrial protein AtMg00860 (ORF158)
Scaffold_3794 30989 C T 30 1002.77 noncoding Transition 1/1 Uncharacterized mitochondrial protein AtMg00860 (ORF158)
Scaffold_3117 29459 C T 250 6614.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf11 (ORF7323)
Scaffold_3117 29087 C T 250 2794.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)
Scaffold_3117 29151 C T 250 609.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)
Scaffold_3117 29248 C T 250 7850.77 CDS Transition 1/1 Uncharacterized mitochondrial protein ymf40 (ORF502)
Scaffold_3117 29291 C T 249 6996.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)
Scaffold_3117 29381 C T 250 6642.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)

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