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RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_26 1367640 G T 13 95.77 CDS Transversion 0/1 Unannotated
Scaffold_26 1370017 A T 10 335.78 noncoding Transversion 1/1 Unannotated
Scaffold_26 1533524 G T 12 149.77 exon Transversion 0/1 Unannotated
Scaffold_26 1533525 T G 11 126.77 exon Transversion 0/1 Unannotated
Scaffold_26 1537210 T A 15 74.77 CDS Transversion 0/1 Threonine--tRNA ligase, chloroplastic/mitochondrial 2 (EC 6.1.1.3) (Protein... more
Threonine--tRNA ligase, chloroplastic/mitochondrial 2 (EC 6.1.1.3) (Protein EMBRYO DEFECTIVE 2761) (Threonyl-tRNA synthetase) (ThrRS)
Scaffold_26 1712852 A C 23 605.77 CDS Transversion 1/1 Unannotated
Scaffold_26 2059417 A T 24 68.77 exon Transversion 0/1 Unannotated
Scaffold_27 84224 C A 10 95.77 intron Transversion 0/1 Unannotated
Scaffold_27 84287 T G 50 255.77 CDS Transversion 0/1 Unannotated
Scaffold_27 113999 C G 10 265.8 CDS Transversion 1/1 Unannotated
Scaffold_27 304459 T A 12 61.77 exon Transversion 0/1 Unannotated
Scaffold_27 319381 T G 22 200.77 exon Transversion 0/1 Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing ... more
Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing protein 12) (Lysine-specific histone demethylase REF6) (Protein RELATIVE OF EARLY FLOWERING 6)
Scaffold_27 319417 C G 26 457.77 exon Transversion 0/1 Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing ... more
Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing protein 12) (Lysine-specific histone demethylase REF6) (Protein RELATIVE OF EARLY FLOWERING 6)
Scaffold_27 319597 G C 15 100.77 exon Transversion 0/1 Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing ... more
Lysine-specific demethylase REF6 (EC 1.14.11.-) (Jumonji domain-containing protein 12) (Lysine-specific histone demethylase REF6) (Protein RELATIVE OF EARLY FLOWERING 6)
Scaffold_27 480791 C A 10 354.77 intron Transversion 1/1 Unannotated
Scaffold_27 487857 T G 24 37.77 CDS Transversion 0/1 Unannotated
Scaffold_27 591853 G C 108 176.77 CDS Transversion 0/1 Unannotated
Scaffold_27 643323 G C 41 930.77 intron Transversion 1/1 Unannotated
Scaffold_27 767795 G T 14 30.77 noncoding Transversion 0/1 Unannotated
Scaffold_27 788848 T G 24 101.77 CDS Transversion 0/1 Unannotated

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