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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_150 163994 G C 59 110.77 noncoding Transversion 0/1 Unannotated
Scaffold_150 183598 A T 12 275.8 CDS Transversion 1/1 Unannotated
Scaffold_150 186371 A C 14 234.77 CDS Transversion 0/1 Unannotated
Scaffold_150 207089 C A 46 50.77 exon Transversion 0/1 Unannotated
Scaffold_150 245849 C A 17 46.77 exon Transversion 0/1 Unannotated
Scaffold_150 245850 C G 16 52.77 exon Transversion 0/1 Unannotated
Scaffold_150 262233 C G 75 322.77 CDS Transversion 0/1 Unannotated
Scaffold_150 281472 A T 40 1193.77 CDS Transversion 1/1 Unannotated
Scaffold_150 383538 A T 18 34.77 exon Transversion 0/1 Unannotated
Scaffold_150 498950 A C 18 43.77 CDS Transversion 0/1 Unannotated
Scaffold_150 502012 T A 10 55.77 CDS Transversion 0/1 Unannotated
Scaffold_150 669026 T A 10 264.8 CDS Transversion 1/1 Unannotated
Scaffold_150 672086 A C 12 413.77 exon Transversion 1/1 Unannotated
Scaffold_150 677818 T A 70 1948.77 CDS Transversion 1/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 677821 T A 63 1807.77 CDS Transversion 1/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 678355 T A 23 515.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 679049 T A 23 305.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_151 249226 T G 12 135.77 exon Transversion 0/1 Unannotated
Scaffold_151 428475 T G 10 340.78 noncoding Transversion 1/1 Unannotated
Scaffold_152 206178 G C 32 887.77 exon Transversion 1/1 Pentatricopeptide repeat-containing protein At2g01860 (Protein EMBRYO DEFEC... more
Pentatricopeptide repeat-containing protein At2g01860 (Protein EMBRYO DEFECTIVE 975)

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