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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_538 62558 G C 14 489.77 exon Transversion 1/1 Unannotated
Scaffold_538 62559 A C 19 68.77 exon Transversion 0/1 Unannotated
Scaffold_539 64388 G T 145 4437.77 exon Transversion 1/1 Unannotated
Scaffold_545 24631 C A 46 1412.77 exon Transversion 1/1 Unannotated
Scaffold_545 25054 A T 44 305.77 exon Transversion 0/1 Unannotated
Scaffold_545 25101 A T 38 121.77 exon Transversion 0/1 Unannotated
Scaffold_545 25113 T G 43 45.77 exon Transversion 0/1 Unannotated
Scaffold_545 25159 C A 36 1087.77 exon Transversion 1/1 Unannotated
Scaffold_545 32784 G T 20 502.77 CDS Transversion 0/1 Unannotated
Scaffold_545 48351 A C 81 2319.77 exon Transversion 1/1 Unannotated
Scaffold_551 28356 G T 10 172.98 exon Transversion 0/1 Unannotated
Scaffold_553 33454 T G 14 43.77 noncoding Transversion 0/1 Unannotated
Scaffold_553 33456 T A 10 287.03 noncoding Transversion 0/1 Unannotated
Scaffold_556 50876 G T 15 419.77 CDS Transversion 1/1 Unannotated
Scaffold_564 52268 T G 12 289.77 exon Transversion 0/1 Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inh... more
Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inhibitor PPE8B (Pectin methylesterase inhibitor PPE8B); Pectinesterase PPE8B (PE PPE8B) (EC 3.1.1.11) (Pectin methylesterase PPE8B)]
Scaffold_566 3953 T G 12 345.77 CDS Transversion 1/1 Unannotated
Scaffold_575 66750 T A 24 385.77 CDS Transversion 0/1 Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl ami... more
Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S) (Meiotic prophase aminopeptidase 1)
Scaffold_583 42752 A T 17 40.77 noncoding Transversion 0/1 Unannotated
Scaffold_591 50368 C G 196 5879.77 CDS Transversion 1/1 Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid... more
Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein)
Scaffold_593 19612 C A 17 37.77 intron Transversion 0/1 Unannotated

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