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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1104 50836 A C 21 751.77 noncoding Transversion 1/1 E3 ubiquitin-protein ligase RDUF1 (EC 2.3.2.27) (RING and DUF1117 domain-co... more
E3 ubiquitin-protein ligase RDUF1 (EC 2.3.2.27) (RING and DUF1117 domain-containing protein 1) (AtRDUF1) (RING-type E3 ubiquitin transferase RDUF1)
Scaffold_1104 50837 G T 23 831.77 noncoding Transversion 1/1 E3 ubiquitin-protein ligase RDUF1 (EC 2.3.2.27) (RING and DUF1117 domain-co... more
E3 ubiquitin-protein ligase RDUF1 (EC 2.3.2.27) (RING and DUF1117 domain-containing protein 1) (AtRDUF1) (RING-type E3 ubiquitin transferase RDUF1)
Scaffold_1117 15724 G T 93 1788.77 noncoding Transversion 0/1 60S ribosomal protein L7-2
Scaffold_1117 15775 T A 76 147.77 noncoding Transversion 0/1 60S ribosomal protein L7-2
Scaffold_1118 19129 G T 10 266.8 intron Transversion 1/1 Unannotated
Scaffold_1118 49340 G T 16 479.77 CDS Transversion 1/1 APO protein 3, mitochondrial
Scaffold_1119 22809 T A 12 439.77 noncoding Transversion 1/1 Unannotated
Scaffold_1126 46559 A T 14 137.77 noncoding Transversion 0/1 Unannotated
Scaffold_1126 55596 G T 116 3523.77 exon Transversion 1/1 Unannotated
Scaffold_1148 37470 G C 64 136.77 CDS Transversion 0/1 Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide tran... more
Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide transporter 1)
Scaffold_1152 33577 A T 11 370.77 noncoding Transversion 1/1 Unannotated
Scaffold_1153 51299 A T 35 1149.77 noncoding Transversion 1/1 Unannotated
Scaffold_1153 52943 A C 175 6787.77 intron Transversion 1/1 Unannotated
Scaffold_1159 38909 C A 14 395.77 exon Transversion 1/1 Probable disease resistance protein At4g27220
Scaffold_1180 19161 T A 15 61.77 noncoding Transversion 0/1 Unannotated
Scaffold_1180 19179 G C 14 60.77 noncoding Transversion 0/1 Unannotated
Scaffold_1180 52408 A T 11 399.77 noncoding Transversion 1/1 Unannotated
Scaffold_1182 49520 C A 14 463.77 exon Transversion 1/1 Unannotated
Scaffold_1187 31615 A C 10 169.77 noncoding Transversion 0/1 Unannotated
Scaffold_1194 15449 G T 116 3109.77 exon Transversion 1/1 Subtilisin-like protease SBT1.4 (EC 3.4.21.-) (Subtilase subfamily 1 member... more
Subtilisin-like protease SBT1.4 (EC 3.4.21.-) (Subtilase subfamily 1 member 4) (AtSBT1.4)

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