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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2561 18970 T G 32 1117.77 exon Transversion 1/1 Cytochrome P450 98A3 (EC 1.14.-.-) (Protein REDUCED EPIDERMAL FLUORESCENCE ... more
Cytochrome P450 98A3 (EC 1.14.-.-) (Protein REDUCED EPIDERMAL FLUORESCENCE 8) (p-coumaroylshikimate/quinate 3'-hydrolxylase) (C3'H)
Scaffold_2561 21462 G C 18 517.77 noncoding Transversion 0/1 Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylas... more
Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (C4H) (CA4H) (Cytochrome P450 73) (Cytochrome P450C4H)
Scaffold_2561 21463 T A 16 394.77 noncoding Transversion 0/1 Unannotated
Scaffold_2562 20213 T G 16 340.77 exon Transversion 0/1 Unannotated
Scaffold_2562 95121 A C 12 421.77 noncoding Transversion 1/1 Unannotated
Scaffold_2566 90412 G T 55 1797.77 CDS Transversion 1/1 Unannotated
Scaffold_2570 22222 T A 41 1308.77 noncoding Transversion 1/1 Unannotated
Scaffold_2570 61324 C G 21 354.77 CDS Transversion 0/1 Cell division cycle 20.1, cofactor of APC complex (AtCDC20.1)
Scaffold_2570 61360 G T 79 101.77 CDS Transversion 0/1 Cell division cycle 20.1, cofactor of APC complex (AtCDC20.1)
Scaffold_2570 61372 T A 85 155.77 CDS Transversion 0/1 Cell division cycle 20.1, cofactor of APC complex (AtCDC20.1)
Scaffold_2570 61501 A T 54 136.77 CDS Transversion 0/1 Cell division cycle 20.1, cofactor of APC complex (AtCDC20.1)
Scaffold_2571 13926 T G 14 172.77 CDS Transversion 0/1 Unannotated
Scaffold_2572 72010 A T 10 264.8 exon Transversion 1/1 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic (Prote... more
Pentatricopeptide repeat-containing protein At3g57430, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 84)
Scaffold_2583 8536 A T 56 39.77 noncoding Transversion 0/1 Unannotated
Scaffold_2583 8599 A C 250 50.77 noncoding Transversion 0/1 Unannotated
Scaffold_2583 8799 G C 75 2700.77 noncoding Transversion 1/1 Unannotated
Scaffold_2585 33510 A T 13 371.77 CDS Transversion 1/1 CLP protease regulatory subunit CLPX3, mitochondrial
Scaffold_2585 72194 T G 29 100.77 CDS Transversion 0/1 Unannotated
Scaffold_2585 72282 T G 29 65.77 CDS Transversion 0/1 Unannotated
Scaffold_2587 15607 A T 14 109.77 noncoding Transversion 0/1 Unannotated

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