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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2699 106293 T A 38 110.77 exon Transversion 0/1 Unannotated
Scaffold_2699 140895 C A 33 1021.77 CDS Transversion 1/1 Unannotated
Scaffold_2699 225304 C G 69 2591.77 noncoding Transversion 1/1 Unannotated
Scaffold_2699 225306 A C 76 2870.77 noncoding Transversion 1/1 Unannotated
Scaffold_2703 19033 G C 14 146.9 noncoding Transversion 1/1 Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein ... more
Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47)
Scaffold_2704 35698 G T 15 274.77 exon Transversion 0/1 Unannotated
Scaffold_2705 31204 G T 16 474.77 noncoding Transversion 1/1 Unannotated
Scaffold_2706 546 A C 138 1574.77 CDS Transversion 0/1 Unannotated
Scaffold_2706 930 T G 16 57.77 intron Transversion 0/1 Unannotated
Scaffold_2706 1031 A T 17 57.77 intron Transversion 0/1 Unannotated
Scaffold_2706 1038 C A 14 61.77 intron Transversion 0/1 Unannotated
Scaffold_2706 1982 T A 22 166.77 CDS Transversion 0/1 Unannotated
Scaffold_2707 42126 G T 12 439.77 exon Transversion 1/1 Cryptochrome DASH, chloroplastic/mitochondrial (Cryptochrome-3)
Scaffold_2707 42446 T A 17 340.77 exon Transversion 0/1 Unannotated
Scaffold_2708 13174 A T 10 359.77 exon Transversion 1/1 Unannotated
Scaffold_2714 43979 G T 250 60.77 noncoding Transversion 0/1 Unannotated
Scaffold_2720 20308 A C 16 563.77 noncoding Transversion 1/1 50S ribosomal protein L20, chloroplastic
Scaffold_2720 20309 G T 16 563.77 noncoding Transversion 1/1 50S ribosomal protein L20, chloroplastic
Scaffold_2721 49960 C A 57 1985.77 noncoding Transversion 1/1 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H... more
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
Scaffold_2723 10293 A C 50 1409.77 noncoding Transversion 1/1 Unannotated

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