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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2890 66254 C G 17 610.77 noncoding Transversion 1/1 Unannotated
Scaffold_2893 318 C G 64 2144.77 noncoding Transversion 1/1 Unannotated
Scaffold_2893 319 T G 37 1009.77 noncoding Transversion 0/1 Unannotated
Scaffold_2895 43218 C A 16 413.77 noncoding Transversion 0/1 Unannotated
Scaffold_2901 2336 G T 192 227.77 noncoding Transversion 0/1 Unannotated
Scaffold_2901 2356 T A 86 3096.77 noncoding Transversion 1/1 Unannotated
Scaffold_2906 3942 G C 216 8233.77 exon Transversion 1/1 Catalase (EC 1.11.1.6)
Scaffold_2906 3946 T A 204 7765.77 exon Transversion 1/1 Catalase (EC 1.11.1.6)
Scaffold_2908 47329 G C 14 295.77 noncoding Transversion 0/1 Unannotated
Scaffold_2911 36128 G C 19 604.77 exon Transversion 1/1 Unannotated
Scaffold_2912 62278 G T 95 3411.77 noncoding Transversion 1/1 Unannotated
Scaffold_2912 62602 G T 37 1200.77 noncoding Transversion 1/1 Unannotated
Scaffold_2912 68787 G C 18 509.77 exon Transversion 1/1 Unannotated
Scaffold_2916 3907 G T 12 374.77 exon Transversion 1/1 Unannotated
Scaffold_2917 7949 C A 11 378.77 intron Transversion 1/1 Superoxide dismutase [Cu-Zn], chloroplastic (EC 1.15.1.1)
Scaffold_2917 48470 T G 59 1652.77 noncoding Transversion 1/1 Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein ... more
Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47)
Scaffold_2924 50199 T G 19 617.77 noncoding Transversion 1/1 Unannotated
Scaffold_2924 57910 A C 74 1141.77 noncoding Transversion 0/1 Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA... more
Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA)
Scaffold_2924 57911 G T 110 1069.77 noncoding Transversion 0/1 Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA... more
Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA)
Scaffold_2924 57912 A C 142 1106.77 noncoding Transversion 0/1 Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA... more
Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA)

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