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RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2924 57914 G C 250 892.77 noncoding Transversion 0/1 Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA... more
Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA)
Scaffold_2929 44937 T G 35 33.77 noncoding Transversion 0/1 Unannotated
Scaffold_2930 37108 A C 36 41.77 noncoding Transversion 0/1 Unannotated
Scaffold_2932 15017 G T 131 552.77 CDS Transversion 0/1 Unannotated
Scaffold_2932 15027 A C 250 48.77 CDS Transversion 0/1 Unannotated
Scaffold_2932 15049 A C 250 281.77 CDS Transversion 0/1 Unannotated
Scaffold_2933 2610 C G 12 81.77 noncoding Transversion 0/1 Unannotated
Scaffold_2934 38659 A T 247 339.77 noncoding Transversion 0/1 Unannotated
Scaffold_2934 39078 C A 122 403.77 noncoding Transversion 0/1 Unannotated
Scaffold_2936 41128 A T 18 43.77 exon Transversion 0/1 Unannotated
Scaffold_2936 41129 A C 18 43.77 exon Transversion 0/1 Unannotated
Scaffold_2938 35773 A C 74 2671.77 noncoding Transversion 1/1 Unannotated
Scaffold_2938 35774 G T 84 3081.77 noncoding Transversion 1/1 Unannotated
Scaffold_2939 58156 T A 15 429.77 exon Transversion 1/1 Unannotated
Scaffold_2939 58391 A C 24 643.77 intron Transversion 1/1 Unannotated
Scaffold_2939 58460 A T 12 364.77 intron Transversion 1/1 Unannotated
Scaffold_2942 7775 A C 35 59.77 noncoding Transversion 0/1 Unannotated
Scaffold_2942 26003 A C 10 193.78 exon Transversion 0/1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Prot... more
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2942 26588 A C 11 312.78 CDS Transversion 1/1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Prot... more
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2942 26757 T G 11 166.77 CDS Transversion 0/1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Prot... more
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]

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