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RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2943 12862 C G 248 9498.77 intron Transversion 1/1 Unannotated
Scaffold_2943 12978 T A 250 9156.77 intron Transversion 1/1 Unannotated
Scaffold_2943 13004 C G 250 9469.77 intron Transversion 1/1 Unannotated
Scaffold_2943 13245 G C 172 5311.77 CDS Transversion 1/1 Unannotated
Scaffold_2952 23215 G C 15 547.77 noncoding Transversion 1/1 Unannotated
Scaffold_2953 5392 A T 23 803.77 noncoding Transversion 1/1 Unannotated
Scaffold_2953 5701 C A 20 699.77 noncoding Transversion 1/1 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H... more
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
Scaffold_2953 5702 A T 20 744.77 noncoding Transversion 1/1 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H... more
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
Scaffold_2953 22484 A C 12 388.77 intron Transversion 1/1 Unannotated
Scaffold_2953 29050 C A 14 49.74 noncoding Transversion 1/1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P... more
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)
Scaffold_2954 113 G T 41 1050.77 CDS Transversion 1/1 UDP-glycosyltransferase 88F4 (EC 2.4.1.-) (UDP-glucose:chalcone 2'-O-glucos... more
UDP-glycosyltransferase 88F4 (EC 2.4.1.-) (UDP-glucose:chalcone 2'-O-glucosyltransferase)
Scaffold_2962 9401 T A 250 8655.77 noncoding Transversion 1/1 Unannotated
Scaffold_2962 9537 A C 117 4234.77 noncoding Transversion 1/1 Unannotated
Scaffold_2962 9539 C G 62 2251.77 noncoding Transversion 1/1 Unannotated
Scaffold_2963 2192 T G 24 752.77 exon Transversion 1/1 Unannotated
Scaffold_2963 17596 G T 250 347.77 noncoding Transversion 0/1 Unannotated
Scaffold_2966 14556 G T 58 2012.77 noncoding Transversion 1/1 Unannotated
Scaffold_2966 14558 C G 42 1504.77 noncoding Transversion 1/1 Unannotated
Scaffold_2967 50463 G C 23 533.77 exon Transversion 0/1 Unannotated
Scaffold_2967 51263 T G 11 264.8 CDS Transversion 1/1 Unannotated

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