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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3411 18138 C A 10 361.77 CDS Transversion 1/1 Unannotated
Scaffold_3412 2677 G T 43 1600.77 noncoding Transversion 1/1 Unannotated
Scaffold_3414 5132 C A 16 566.77 noncoding Transversion 1/1 Unannotated
Scaffold_3415 393 T G 44 42.77 noncoding Transversion 0/1 DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encode... more
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) (Fragment)
Scaffold_3415 401 G T 13 485.77 noncoding Transversion 1/1 DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encode... more
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) (Fragment)
Scaffold_3420 56501 A T 12 237.84 exon Transversion 1/1 Unannotated
Scaffold_3420 56744 T A 16 432.77 exon Transversion 1/1 Unannotated
Scaffold_3420 56977 G T 23 137.77 exon Transversion 0/1 Unannotated
Scaffold_3425 14985 A T 12 302.78 noncoding Transversion 1/1 Unannotated
Scaffold_3425 14989 G C 13 311.78 noncoding Transversion 1/1 Unannotated
Scaffold_3431 5736 G T 22 145.77 noncoding Transversion 0/1 Unannotated
Scaffold_3431 5738 G C 20 49.77 noncoding Transversion 0/1 Unannotated
Scaffold_3431 18661 C A 29 1012.77 noncoding Transversion 1/1 Unannotated
Scaffold_3431 18662 T G 28 972.77 noncoding Transversion 1/1 Unannotated
Scaffold_3432 18911 G C 248 90.77 exon Transversion 0/1 Unannotated
Scaffold_3435 10704 C G 15 154.77 noncoding Transversion 0/1 Unannotated
Scaffold_3436 52011 A C 12 375.77 noncoding Transversion 1/1 Unannotated
Scaffold_3436 52015 A C 250 8386.77 noncoding Transversion 1/1 Unannotated
Scaffold_3438 45094 C G 10 237.77 noncoding Transversion 0/1 Unannotated
Scaffold_3440 13763 A T 17 487.77 noncoding Transversion 0/1 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-) (NAD... more
NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B)

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