| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_140 | 216428 | T | G | 14 | 331.78 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_140 | 260478 | A | T | 63 | 34.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_140 | 458843 | G | T | 38 | 347.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_141 | 142172 | A | T | 32 | 32.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_141 | 195154 | C | A | 14 | 139.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_141 | 236050 | G | C | 12 | 193.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_141 | 299970 | C | A | 250 | 3277.77 | CDS | Transversion | 0/1 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 302949 | G | T | 165 | 3748.77 | CDS | Transversion | 0/1 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 305572 | C | A | 249 | 7001.77 | exon | Transversion | 0/1 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 305985 | T | G | 39 | 349.77 | exon | Transversion | 0/1 | Putative UDP-rhamnose:rhamnosyltransferase 1 (FaRT1) (EC 2.4.1.-) (Glycosyltransferase 4) (FaGT4) |
| Scaffold_141 | 330735 | C | A | 10 | 163.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_141 | 418463 | C | G | 29 | 33.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 61900 | A | T | 101 | 318.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 62140 | G | T | 14 | 67.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 62141 | T | G | 12 | 66.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 151150 | C | A | 15 | 60.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 151363 | A | C | 15 | 35.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 207124 | C | G | 250 | 116.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 208006 | C | G | 12 | 87.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_142 | 596267 | T | A | 14 | 101.77 | noncoding | Transversion | 0/1 | Unannotated |