| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_178 | 581364 | A | C | 27 | 283.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_178 | 581818 | A | T | 36 | 332.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_178 | 581926 | C | A | 45 | 479.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_178 | 581979 | A | T | 18 | 53.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_180 | 72269 | A | T | 11 | 173.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_180 | 520061 | C | G | 16 | 59.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 69043 | G | T | 41 | 360.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 69056 | A | T | 38 | 292.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 69077 | G | T | 26 | 338.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 69092 | T | A | 21 | 249.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 93675 | G | C | 14 | 227.77 | intron | Transversion | 0/1 | ABC transporter B family member 10 (ABC transporter ABCB.10) (AtABCB10) (Multidrug resistance protein 10) (P-glycoprotein 10) |
| Scaffold_181 | 95954 | A | T | 32 | 69.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 131790 | A | T | 20 | 62.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 135358 | A | C | 69 | 566.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 135871 | A | C | 52 | 58.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 147923 | T | A | 30 | 62.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 160834 | T | A | 26 | 478.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 382130 | G | C | 133 | 2040.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_181 | 425597 | A | C | 10 | 83.77 | intron | Transversion | 0/1 | Calcium-dependent protein kinase 1 (OsCDPK1) (OsCPK1) (EC 2.7.11.1) |
| Scaffold_181 | 481703 | T | G | 17 | 209.77 | intron | Transversion | 0/1 | Unannotated |