| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_10 | 1820722 | C | A | 42 | 389.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_10 | 1836792 | C | A | 10 | 77.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_10 | 1874870 | T | A | 31 | 86.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_10 | 1882607 | T | G | 10 | 79.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 321422 | A | C | 22 | 205.81 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 486410 | G | T | 22 | 177.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 551392 | C | A | 60 | 1316.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 690205 | A | T | 28 | 564.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 690228 | C | G | 28 | 647.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 690250 | T | G | 30 | 103.77 | CDS | Transversion | 0/1 | Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1) |
| Scaffold_11 | 1051742 | A | C | 250 | 534.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1054295 | A | T | 25 | 32.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1127856 | A | T | 10 | 55.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1152650 | C | G | 56 | 313.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1342656 | T | A | 11 | 108.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1633992 | G | C | 28 | 606.53 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1658313 | G | C | 59 | 394.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1658314 | C | A | 69 | 908.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1658438 | T | A | 37 | 399.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_11 | 1715548 | C | A | 19 | 282.77 | intron | Transversion | 0/1 | Unannotated |