| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_744 | 12237 | T | G | 17 | 257.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_746 | 7082 | T | G | 10 | 141.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_746 | 7876 | T | A | 13 | 170.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_750 | 64954 | T | G | 10 | 88.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_753 | 60071 | G | C | 33 | 474.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_753 | 64232 | G | C | 41 | 154.77 | intron | Transversion | 0/1 | Protein NRT1/ PTR FAMILY 3.1 (AtNPF3.1) |
| Scaffold_753 | 65579 | G | T | 232 | 865.77 | CDS | Transversion | 0/1 | Protein NRT1/ PTR FAMILY 1.2 (AtNPF1.2) (Nitrate transporter 1.11) |
| Scaffold_760 | 626 | C | A | 14 | 276.03 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_760 | 2346 | G | T | 10 | 131.77 | noncoding | Transversion | 0/1 | Endoplasmin homolog (Glucose-regulated protein 94 homolog) (GRP-94 homolog) |
| Scaffold_761 | 64914 | T | G | 15 | 345.53 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_764 | 8684 | C | G | 10 | 60.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_764 | 57093 | A | C | 10 | 141.94 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_772 | 11495 | G | C | 14 | 206.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_772 | 39657 | T | A | 47 | 144.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_774 | 790 | T | G | 150 | 2714.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_778 | 4513 | C | G | 14 | 98.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_781 | 62786 | T | G | 14 | 117.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_781 | 62787 | A | C | 18 | 276.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_782 | 46497 | T | A | 68 | 1641.77 | CDS | Transversion | 0/1 | Cytochrome c |
| Scaffold_786 | 10377 | A | C | 250 | 2310.77 | exon | Transversion | 0/1 | Unannotated |