| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3027 | 52376 | C | A | 174 | 584.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3027 | 52390 | C | A | 169 | 272.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3027 | 52422 | A | T | 185 | 708.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3029 | 8744 | C | A | 11 | 49.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3029 | 13587 | C | G | 46 | 900.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3029 | 16547 | C | G | 10 | 89.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3030 | 17380 | C | A | 20 | 279.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3037 | 22334 | A | T | 13 | 54.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3037 | 23235 | G | T | 15 | 81.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 52429 | G | T | 15 | 349.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 52436 | G | T | 17 | 407.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 52552 | C | G | 32 | 774.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 52576 | G | T | 27 | 554.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 52791 | A | C | 42 | 541.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 53074 | C | G | 10 | 111.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 54068 | C | A | 49 | 417.77 | CDS | Transversion | 0/1 | Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17) |
| Scaffold_3039 | 54284 | G | C | 23 | 101.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 54285 | G | T | 21 | 65.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3039 | 54959 | T | G | 207 | 3108.77 | intron | Transversion | 0/1 | Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17) |
| Scaffold_3039 | 55112 | A | T | 13 | 52.77 | intron | Transversion | 0/1 | Unannotated |