SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
Scaffold_3155
|
43885
|
G
|
T
|
131
|
572.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3156
|
2043
|
A
|
C
|
116
|
1294.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3156
|
2045
|
G
|
T
|
139
|
440.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3160
|
22014
|
A
|
T
|
110
|
161.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3160
|
22431
|
C
|
A
|
123
|
2531.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3160
|
23527
|
C
|
G
|
12
|
56.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3162
|
42838
|
A
|
T
|
13
|
110.77
|
CDS
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3166
|
51209
|
A
|
C
|
18
|
300.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3166
|
51282
|
T
|
A
|
21
|
81.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3166
|
51283
|
A
|
T
|
21
|
460.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3166
|
52161
|
A
|
T
|
22
|
309.77
|
CDS
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3167
|
44681
|
G
|
C
|
18
|
309.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3167
|
44810
|
T
|
G
|
15
|
157.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3167
|
44869
|
A
|
C
|
89
|
550.77
|
CDS
|
Transversion
|
0/1
|
Flavin mononucleotide hydrolase 1, chloroplatic (AtcpFHy1) (EC 3.1.3.102) (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase) (AtcpFHy1/PyrP1) (EC 3.1.3.104) (5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate phosphatase) (ARPP phosphata
|
Scaffold_3167
|
45113
|
T
|
A
|
14
|
315.77
|
intron
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3172
|
18319
|
G
|
T
|
17
|
108.77
|
noncoding
|
Transversion
|
0/1
|
Adenylate kinase 2, chloroplastic (AK 2) (EC 2.7.4.3) (ATP-AMP transphosphorylase 2) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase 2) (AMK2)
|
Scaffold_3177
|
26700
|
A
|
T
|
97
|
944.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3177
|
26787
|
G
|
T
|
21
|
95.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3177
|
26804
|
A
|
C
|
16
|
108.77
|
exon
|
Transversion
|
0/1
|
Unannotated
|
Scaffold_3180
|
32892
|
A
|
T
|
250
|
2448.77
|
noncoding
|
Transversion
|
0/1
|
Unannotated
|