| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3315 | 35782 | T | A | 49 | 686.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3315 | 35903 | T | A | 21 | 190.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3315 | 36034 | A | C | 36 | 118.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3315 | 36083 | C | A | 34 | 230.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3315 | 36253 | A | C | 25 | 417.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3320 | 15511 | G | C | 10 | 43.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3320 | 16018 | A | T | 16 | 276.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3323 | 38726 | C | G | 12 | 107.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3323 | 38797 | C | G | 30 | 520.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3326 | 12682 | T | G | 143 | 1707.77 | CDS | Transversion | 0/1 | COP1-interactive protein 1 |
| Scaffold_3326 | 12702 | G | T | 147 | 1853.77 | CDS | Transversion | 0/1 | COP1-interactive protein 1 |
| Scaffold_3327 | 42835 | A | C | 67 | 160.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3327 | 42861 | T | G | 61 | 100.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3339 | 5860 | A | C | 78 | 1670.89 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3339 | 6263 | G | T | 28 | 650.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3343 | 18284 | C | A | 25 | 299.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3355 | 44746 | G | T | 35 | 42.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3362 | 2856 | A | T | 250 | 2418.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3362 | 2924 | T | A | 250 | 2127.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3362 | 2938 | G | C | 250 | 2564.77 | CDS | Transversion | 0/1 | Unannotated |