| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3791 | 8536 | T | G | 34 | 108.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3791 | 16010 | C | A | 19 | 394.28 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3791 | 16016 | G | C | 21 | 409.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3791 | 31216 | C | G | 12 | 119.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3791 | 31664 | C | A | 26 | 373.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3794 | 97 | T | A | 57 | 501.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3794 | 201 | G | T | 250 | 1157.77 | CDS | Transversion | 0/1 | Reticulon-like protein B18 (AtRTNLB18) |
| Scaffold_3794 | 436 | T | A | 82 | 1604.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3794 | 798 | G | C | 250 | 5139.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3794 | 858 | A | T | 226 | 1581.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3794 | 1295 | G | T | 125 | 1811.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3797 | 27098 | A | C | 42 | 731.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3798 | 6135 | A | C | 82 | 2005.77 | CDS | Transversion | 0/1 | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) |
| Scaffold_3798 | 6181 | A | T | 81 | 106.77 | CDS | Transversion | 0/1 | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) |
| Scaffold_3798 | 6219 | A | T | 44 | 1030.77 | CDS | Transversion | 0/1 | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) |
| Scaffold_3798 | 6300 | A | T | 11 | 88.77 | CDS | Transversion | 0/1 | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) |
| Scaffold_3798 | 6321 | A | C | 30 | 661.77 | CDS | Transversion | 0/1 | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) |
| Scaffold_3798 | 29362 | A | C | 12 | 79.77 | CDS | Transversion | 0/1 | Probable sodium/metabolite cotransporter BASS4, chloroplastic (Bile acid transporter 4) (Bile acid-sodium symporter family protein 4) |
| Scaffold_3798 | 42183 | T | A | 19 | 237.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3808 | 27337 | A | T | 13 | 259.77 | CDS | Transversion | 0/1 | Unannotated |