| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_21 | 1657873 | G | A | 31 | 104.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_21 | 1658213 | C | T | 16 | 262.22 | exon | Transition | 0/1 | Unannotated |
| Scaffold_21 | 1680130 | A | G | 20 | 214.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_21 | 1680158 | T | C | 28 | 237.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_21 | 1950427 | A | G | 91 | 270.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_21 | 1992485 | G | A | 15 | 202.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_21 | 2064181 | G | A | 94 | 210.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_21 | 2084318 | A | G | 11 | 76.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_21 | 2110835 | A | G | 63 | 36.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_21 | 2151030 | A | G | 31 | 73.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_22 | 112048 | C | T | 29 | 239.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_22 | 739079 | C | T | 37 | 299.77 | CDS | Transition | 0/1 | Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1) |
| Scaffold_22 | 739104 | A | G | 28 | 234.77 | CDS | Transition | 0/1 | Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1) |
| Scaffold_22 | 741147 | G | A | 19 | 54.77 | CDS | Transition | 0/1 | Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1) |
| Scaffold_22 | 744749 | A | G | 11 | 229.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_22 | 744751 | T | C | 10 | 206.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_22 | 836864 | C | T | 33 | 31.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_22 | 881076 | C | T | 11 | 132.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_22 | 1241557 | A | G | 11 | 222.1 | intron | Transition | 0/1 | Unannotated |
| Scaffold_22 | 1433049 | T | C | 250 | 349.77 | exon | Transition | 0/1 | Unannotated |