| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_36 | 1162770 | T | C | 21 | 427.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_36 | 1464860 | T | C | 14 | 131.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_36 | 1636893 | G | A | 16 | 326.77 | exon | Transition | 0/1 | Protein SRG1 (AtSRG1) (Protein SENESCENCE-RELATED GENE 1) |
| Scaffold_36 | 1637003 | T | C | 87 | 107.77 | exon | Transition | 0/1 | Protein SRG1 (AtSRG1) (Protein SENESCENCE-RELATED GENE 1) |
| Scaffold_36 | 1640628 | A | G | 250 | 186.77 | CDS | Transition | 0/1 | Protein SRG1 (AtSRG1) (Protein SENESCENCE-RELATED GENE 1) |
| Scaffold_36 | 1656921 | C | T | 29 | 268.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_36 | 1732348 | C | T | 32 | 34.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_36 | 1796253 | C | T | 33 | 211.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_36 | 1829341 | T | C | 16 | 44.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_37 | 245157 | A | G | 11 | 228.77 | CDS | Transition | 0/1 | U-box domain-containing protein 4 (EC 2.3.2.27) (Plant U-box protein 4) (RING-type E3 ubiquitin transferase PUB4) |
| Scaffold_37 | 400614 | G | A | 114 | 958.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_37 | 432974 | G | A | 15 | 109.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_37 | 613596 | A | G | 21 | 51.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_37 | 990438 | A | G | 44 | 91.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_37 | 1035523 | A | G | 36 | 302.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_37 | 1037623 | C | T | 28 | 46.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_37 | 1037635 | A | G | 28 | 50.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_37 | 1317592 | G | A | 47 | 466.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_37 | 1410778 | T | C | 11 | 76.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_38 | 39571 | T | C | 12 | 98.77 | noncoding | Transition | 0/1 | Unannotated |