| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_49 | 2079457 | A | G | 34 | 90.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2080950 | T | C | 50 | 712.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2081557 | C | T | 11 | 189.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2136132 | T | C | 66 | 264.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2136454 | T | C | 80 | 373.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2136968 | C | T | 11 | 172.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2143595 | C | T | 58 | 469.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2143616 | T | C | 43 | 187.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_49 | 2143651 | T | C | 68 | 856.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_50 | 16771 | A | G | 41 | 74.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_50 | 16790 | A | G | 31 | 85.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_50 | 201739 | G | A | 28 | 351.77 | CDS | Transition | 0/1 | Receptor-like protein 2 (AtRLP2) |
| Scaffold_50 | 201797 | T | C | 24 | 264.77 | CDS | Transition | 0/1 | Receptor-like protein 2 (AtRLP2) |
| Scaffold_50 | 211157 | A | G | 20 | 408.77 | noncoding | Transition | 0/1 | Receptor-like protein 7 (AtRLP7) |
| Scaffold_50 | 211167 | C | T | 17 | 47.77 | noncoding | Transition | 0/1 | Receptor-like protein 7 (AtRLP7) |
| Scaffold_50 | 263817 | T | C | 250 | 98.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_50 | 264004 | T | C | 250 | 168.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_50 | 264027 | T | C | 250 | 474.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_50 | 264067 | T | C | 248 | 458.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_50 | 264114 | T | C | 246 | 284.77 | exon | Transition | 0/1 | Unannotated |