| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_52 | 1603979 | G | A | 56 | 39.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1603996 | G | A | 62 | 142.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1604085 | T | C | 249 | 1728.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1604135 | A | G | 250 | 3018.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1663526 | T | C | 73 | 1297.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1663592 | T | C | 39 | 221.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1663628 | T | C | 107 | 1645.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1664192 | T | C | 85 | 1120.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_52 | 1664246 | A | G | 70 | 574.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_53 | 38363 | G | A | 16 | 209.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_53 | 76599 | A | G | 18 | 170.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_53 | 105887 | G | A | 12 | 205.41 | intron | Transition | 0/1 | Unannotated |
| Scaffold_53 | 121878 | A | G | 39 | 64.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_53 | 121887 | A | G | 54 | 477.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_53 | 229382 | A | G | 14 | 91.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_53 | 282499 | A | G | 75 | 752.77 | CDS | Transition | 0/1 | Polyol transporter 5 (Protein POLYOL TRANSPORTER 5) (AtPLT5) (Sugar-proton symporter PLT5) |
| Scaffold_53 | 340555 | A | G | 54 | 807.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_53 | 340558 | G | A | 47 | 626.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_53 | 356464 | T | C | 11 | 193.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_53 | 766280 | G | A | 17 | 346.77 | intron | Transition | 0/1 | Unannotated |