| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_57 | 1525336 | G | A | 184 | 39.77 | exon | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1525510 | C | T | 244 | 1707.77 | exon | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1525564 | G | A | 109 | 1608.77 | exon | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1525594 | G | A | 17 | 75.77 | exon | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1525923 | C | T | 250 | 2232.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1526022 | G | A | 197 | 1077.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1527029 | C | T | 20 | 368.77 | intron | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1527218 | A | G | 245 | 4688.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1527239 | A | G | 247 | 593.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1527256 | A | G | 250 | 1123.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1528031 | A | G | 12 | 133.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1528324 | A | G | 250 | 4812.77 | CDS | Transition | 0/1 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) |
| Scaffold_57 | 1528404 | C | T | 208 | 3607.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1528944 | T | C | 20 | 54.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1528946 | G | A | 23 | 42.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1528966 | T | C | 27 | 638.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1529007 | G | A | 27 | 638.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_57 | 1579439 | A | G | 72 | 52.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_58 | 16340 | T | C | 250 | 43.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_58 | 17130 | T | C | 250 | 124.77 | CDS | Transition | 0/1 | Unannotated |