| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_173 | 318780 | A | G | 17 | 32.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_173 | 318950 | T | C | 15 | 84.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_173 | 381661 | C | T | 118 | 320.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_173 | 427228 | T | C | 64 | 185.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_173 | 431190 | G | A | 144 | 3028.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_173 | 431198 | A | G | 133 | 2327.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_173 | 431704 | G | A | 12 | 202.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_173 | 431744 | T | C | 11 | 112.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_173 | 567053 | A | G | 90 | 66.77 | CDS | Transition | 0/1 | Calcium-dependent protein kinase (CDPK) (EC 2.7.11.1) |
| Scaffold_174 | 128803 | T | C | 250 | 76.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 128892 | T | C | 250 | 127.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 129035 | A | G | 250 | 168.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 129221 | T | C | 250 | 158.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 129277 | T | C | 250 | 70.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 129310 | T | C | 250 | 68.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 129328 | T | C | 250 | 380.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_174 | 332829 | T | C | 33 | 59.77 | CDS | Transition | 0/1 | Myosin-6 (AtMYA2) |
| Scaffold_175 | 26103 | T | C | 14 | 43.77 | CDS | Transition | 0/1 | Cell division cycle protein 27 homolog B (CDC27 homolog B) (Protein HOBBIT) |
| Scaffold_175 | 98938 | A | G | 47 | 883.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_175 | 98941 | G | A | 48 | 1038.77 | CDS | Transition | 0/1 | Unannotated |