| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2451 | 21471 | T | C | 250 | 103.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2452 | 129294 | A | G | 35 | 38.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_2456 | 2474 | T | C | 201 | 1323.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2456 | 50173 | A | G | 99 | 719.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_2456 | 111339 | G | A | 17 | 55.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_2456 | 115028 | T | C | 13 | 188.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_2457 | 22178 | C | T | 11 | 36.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2457 | 89476 | T | C | 17 | 195.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2457 | 90361 | T | C | 35 | 331.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2457 | 90433 | C | T | 41 | 620.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2457 | 90511 | T | C | 11 | 79.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 47943 | A | G | 102 | 41.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 48030 | C | T | 92 | 671.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 50017 | T | C | 59 | 318.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 50056 | A | G | 89 | 1076.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 50139 | A | G | 100 | 945.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2458 | 50257 | A | G | 25 | 137.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_2459 | 131888 | G | A | 12 | 38.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_2462 | 19413 | T | C | 22 | 406.77 | CDS | Transition | 0/1 | Plant-specific TFIIB-related protein PTF2 (Protein POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2) (TFIIB-related protein PTF2) |
| Scaffold_2463 | 61492 | T | C | 35 | 527.77 | exon | Transition | 0/1 | Unannotated |