| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3027 | 52029 | T | C | 35 | 429.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52129 | G | A | 192 | 42.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52135 | T | C | 177 | 1382.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52185 | G | A | 175 | 709.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52216 | C | T | 176 | 310.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52240 | C | T | 183 | 69.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52314 | T | C | 167 | 129.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52322 | C | T | 167 | 639.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3027 | 52454 | G | A | 153 | 33.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3029 | 15879 | A | G | 46 | 49.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3030 | 17383 | A | G | 20 | 275.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3030 | 17422 | T | C | 13 | 117.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3037 | 24807 | T | C | 44 | 848.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 52631 | G | A | 24 | 483.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 52894 | G | A | 35 | 858.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 52966 | G | A | 32 | 703.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 52981 | C | T | 26 | 584.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 52990 | T | C | 26 | 80.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3039 | 53962 | G | A | 130 | 1117.77 | CDS | Transition | 0/1 | Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17) |
| Scaffold_3039 | 54028 | C | T | 155 | 1721.77 | CDS | Transition | 0/1 | Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17) |