| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_68 | 403106 | T | G | 12 | 110.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 452960 | G | C | 71 | 958.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 452966 | A | T | 63 | 1081.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 453009 | A | T | 122 | 530.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 454398 | C | A | 28 | 289.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 454440 | G | C | 33 | 102.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 454512 | T | G | 49 | 401.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 454697 | A | T | 73 | 124.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552170 | A | C | 39 | 63.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552298 | A | T | 250 | 66.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552504 | T | A | 250 | 3145.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552505 | A | T | 250 | 3224.61 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552606 | T | G | 26 | 97.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 552689 | G | T | 69 | 978.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 555863 | A | T | 100 | 58.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 556027 | A | T | 66 | 311.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 556123 | G | C | 65 | 607.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 556547 | A | C | 72 | 410.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_68 | 565506 | A | C | 12 | 68.77 | intron | Transversion | 0/1 | Squalene epoxidase 1 (AtSQE1) (EC 1.14.14.17) (Protein DROUGHT HYPERSENSITIVE 2) (Squalene monooxygenase) (XF1 protein) |
| Scaffold_68 | 687633 | T | G | 60 | 570.77 | exon | Transversion | 0/1 | Protein NETWORKED 1D |