List of pathways, genes and/or enzymes identified for

"Metabolism of Aromatic compounds"

Metagenome name: 7LM

Metagenome ID : mgm4478030.3

Crop: Soybean

S. No. Category Pathway Gene/Enzyme Name
1.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc3
2.Anaerobic degradation of aromatic compoundsHydroxyaromatic decarboxylase familyHydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-)
3.Anaerobic degradation of aromatic compoundsHydroxyaromatic decarboxylase familyHydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-)
4.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationSuccinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE (EC 2.8.3.15)
5.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationAcetophenone carboxylase subunit Apc2
6.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationAcetophenone carboxylase subunit Apc1
7.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradation(S)-1-phenylethanol dehydrogenase
8.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismGlutaryl-CoA dehydrogenase (EC 1.3.99.7)
9.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismCyclohex-1-ene-1-carboxyl-CoA hydratase (EC 4.2.1.17)
10.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc4
11.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC 1.1.1.-)
12.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-ketocyclohexanecarboxyl-CoA hydrolase (EC 4.1.3.36)
13.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadE (EC 1.3.99.15)
14.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadF (EC 1.3.99.15)
15.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadG (EC 1.3.99.15)
16.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayBeta-ketoadipyl CoA thiolase (EC 2.3.1.-)
17.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
18.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
19.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
20.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
21.Metabolism of central aromatic intermediatesN-heterocyclic aromatic compound degradationIsoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
22.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationTranscriptional regulator, IclR family
23.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayPca regulon regulatory protein PcaR
24.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
25.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
26.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwaydicarboxylic acid transporter PcaT
27.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismFumarylacetoacetate (FAA) hydrolase (EC 3.7.1.5)
28.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismFumarylacetoacetate (FAA) hydrolase (EC 4.1.1.68)
29.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismMaleate cis-trans isomerase (EC 5.2.1.1)
30.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismPutative n-hydroxybenzoate hydroxylase
31.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismSalicylate hydroxylase (EC 1.14.13.1)
32.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismsalicylate esterase
33.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationPossible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)
34.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationHomogentisate 1,2-dioxygenase (EC 1.13.11.5)
35.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
36.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)
37.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)
38.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
39.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)
40.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase
41.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayBeta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
42.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayMuconolactone isomerase (EC 5.3.3.4)
43.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayMuconolactone isomerase (EC 5.3.3.4),putative
44.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwaymandelate racemase/muconate lactonizing enzyme family protein
45.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
46.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)
47.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationIntradiol ring-cleavage dioxygenase (EC 1.13.11.1)
48.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationCatechol 2,3-dioxygenase (EC 1.13.11.2)
49.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)
50.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation4-oxalocrotonate tautomerase (EC 5.3.2.-)
51.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation3,4-dihydroxyphenylacetate 2,3-dioxygenase
52.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
53.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)
54.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetaldehyde dehydrogenase (EC 1.2.1.39)
55.NULLPhenylacetyl-CoA catabolic pathway (core)3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-)
56.NULLp-cymene degradationp-cumic aldehyde dehydrogenase (CymC) [EC:1.2.1.3]
57.NULLp-cymene degradationp-cumate dioxygenase large subunit (CmtAb)
58.NULLp-cymene degradationp-cumate dioxygenase ferredoxin
59.NULLp-cymene degradationP-cymene monooxygenase, reductase subunit(CymAb) (EC 1.17.1.-)
60.NULLp-cymene degradation2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC)
61.NULLGentisare degradationputative 4-hydroxybenzoyl-CoA thioesterase
62.NULLGentisare degradationGentisate 1,2-dioxygenase (EC 1.13.11.4)
63.NULLCresol degradation4-cresol dehydrogenase [hydroxylating] flavoprotein subunit (EC 1.17.99.1)
64.NULLcarbazol degradation cluster4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
65.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
66.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaG subunit
67.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaY
68.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN2, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
69.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
70.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaE, ketothiolase
71.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaD, thioesterase
72.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation operon negative regulatory protein PaaX
73.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF
74.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase/reductase, PaaK subunit
75.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaJ subunit
76.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaI subunit
77.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaH subunit
78.NULLToluene 4-monooxygenase (T4MO)Toluene-4-monooxygenase, subunit TmoA
79.NULLcarbazol degradation cluster2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
80.NULLBenzoate transport and degradation clusterhydroxybenzoate permease
81.NULLBenzoate transport and degradation clusterBenzoate transport, ATP binding protein
82.NULLBenzoate transport and degradation clusterBenzoate transport related protein
83.NULLBenzoate transport and degradation cluster4-oxalocrotonate decarboxylase (EC 4.1.1.77)
84.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20)
85.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20)
86.NULLBenzoate transport and degradation cluster2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
87.NULLBenzoate transport and degradation cluster2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
88.NULLAromatic Amin CatabolismNitrilotriacetate monooxygenase component B (EC 1.14.13.-)
89.NULLAromatic Amin CatabolismAldehyde dehydrogenase (EC 1.2.1.3), PaaZ
90.NULLAromatic Amin Catabolism4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-)
91.NULLAromatic Amin Catabolism4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
92.NULLBenzoate transport and degradation clusterBenzoate transport, ATPase component
93.NULLBenzoate transport and degradation clusterBenzoate transport, extracellular ligand-binding receptor
94.NULLBenzoate transport and degradation clusterBenzoate transport, inner membrane transport component
95.NULLBenzoate transport and degradation clusterbenzoyl-CoA-dihydrodiol lyase (BoxC)
96.NULLBenzoate transport and degradation clusterbenzoate degradation ring-cleavage hydrolase
97.NULLBenzoate transport and degradation clusterShikimate kinase I (EC 2.7.1.71)
98.NULLBenzoate transport and degradation clusterRegulatory protein of benzoate catabolism
99.NULLBenzoate transport and degradation clusterPredicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
100.NULLBenzoate transport and degradation clusterBeta-ketoadipyl CoA thiolase (EC 2.3.1.9)
101.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component B
102.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component A
103.NULLBenzoate transport and degradation clusterBenzoate-CoA ligase (EC 6.2.1.25)
104.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator precursor
105.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator
106.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable FERULOYL-CoA synthetase protein
107.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-)
108.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)
109.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProtein involved in meta-pathway of phenol degradation
110.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein (EC 1.1.1.50)
111.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPhenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
112.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationLignostilbene-alpha,beta-dioxygenase and related enzymes
113.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationFeruloyl-CoA synthetase
114.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationChlorogenate esterase
115.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradation4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
116.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradation3-hydroxyphenylpropionic acid transporter
117.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, P1 oxygenase component DmpL (EC 1.14.13.7)
118.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, FAD- and [2Fe-2S]-containing reductase component DmpP
119.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
120.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
121.Peripheral pathways for catabolism of aromatic compoundsToluene degradationToluate 1,2-dioxygenase beta subunit
122.Peripheral pathways for catabolism of aromatic compoundsQuinate degradationQuinate permease
123.Peripheral pathways for catabolism of aromatic compoundsQuinate degradation3-dehydroshikimate dehydratase
124.Peripheral pathways for catabolism of aromatic compoundsQuinate degradation3-dehydroquinate dehydratase I (EC 4.2.1.10)
125.Peripheral pathways for catabolism of aromatic compoundsp-Hydroxybenzoate degradationP-hydroxybenzoate hydroxylase (EC 1.14.13.2)
126.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationvannilate transporter VanK
127.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationvanillin dehydrogenase
128.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationputative 3-hydroxyphenylpropionic acid porine
129.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationlignostilbene-alpha,beta-dioxygenase
130.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase) (EC 1.2.1.28)
131.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
132.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationTranscriptional regulator for ferulate or vanillate catabolism
133.Peripheral pathways for catabolism of aromatic compoundsToluene degradationtoluenesulfonate zinc-independent alcohol dehydrogenase
134.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradation3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
135.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenzoate MFS transporter BenK
136.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenABC operon transcriptional activator BenR
137.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationRing hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
138.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA
139.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
140.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoylformate decarboxylase (EC 4.1.1.7)
141.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate transport protein
142.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
143.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradation1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
144.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismMuconate cycloisomerase (EC 5.5.1.1)
145.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismBenzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)
146.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismBenzoate 1,2-dioxygenase (EC 1.14.12.10)
147.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2,3-dihydroxybiphenyl 1,2-dioxygenase
148.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2-hydroxypenta-2,4-dienoate hydratase
149.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradation2-hydroxychromene-2-carboxylate isomerase
150.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradation2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-)
151.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradationCatechol 1,2-dioxygenase (EC 1.13.11.1)
152.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradation2-chlorobenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.13)
153.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradationbiphenyl-2,3-diol 1,2-dioxygenase III-related protein
154.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationSmall subunit naph/bph dioxygenase
155.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationLarge subunit naph/bph dioxygenase
156.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationDihydrodiol dehydrogenase (EC 1.3.1.56)
157.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39)
158.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase beta subunit (EC 1.14.12.18)
159.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase alpha subunit (EC 1.14.12.18)
160.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationAcetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
161.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismAcetyl-CoA C-acyltransferase (EC 2.3.1.16)